Volume 10; Issue 11 Supplem

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BMC Bioinformatics
Volume 10; Issue 11 Supplem

BMC Bioinformatics

Volume 10; Issue 11 Supplem

1

Proceedings of the 2009 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

Jonathan D Wren, Yuriy Gusev, Raphael D Isokpehi, Daniel Berleant, Ulisses Braga-Neto, Dawn Wilkins, Susan Bridges

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 217 KB

english, 2009

2

Analysis and modeling of time-course gene-expression profiles from nanomaterial-exposed primary human epidermal keratinocytes

Amin Zollanvari, Mary Jane Cunningham, Ulisses Braga-Neto, Edward R Dougherty

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 586 KB

english, 2009

3

Site-specific impacts on gene expression and behavior in fathead minnows (Pimephales promelas) exposedin situto streams adjacent to sewage treatment plants

Natàlia Garcia-Reyero, Ira R Adelman, Dalma Martinović, Li Liu, Nancy D Denslow

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.66 MB

english, 2009

4

Microarray platform consistency is revealed by biologically functional analysis of gene expression profiles

Zhiguang Li, Zhenqiang Su, Zhining Wen, Leming Shi, Tao Chen

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 759 KB

english, 2009

5

Automatic identification of angiogenesis in double stained images of liver tissue

Mutlu Mete, Leah Hennings, Horace J Spencer, Umit Topaloglu

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.55 MB

english, 2009

6

NATbox: a network analysis toolbox in R

Shweta S Chavan, Michael A Bauer, Marco Scutari, Radhakrishnan Nagarajan

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 558 KB

english, 2009

7

Protein local 3D structure prediction by Super Granule Support Vector Machines (Super GSVM)

Bernard Chen, Matthew Johnson

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 485 KB

english, 2009

8

Novel software package for cross-platform transcriptome analysis (CPTRA)

Xin Zhou, Zhen Su, R Douglas Sammons, Yanhui Peng, Patrick J Tranel, C Neal Stewart, Joshua S Yuan

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 2.01 MB

english, 2009

9

An automated proteomic data analysis workflow for mass spectrometry

Ken Pendarvis, Ranjit Kumar, Shane C Burgess, Bindu Nanduri

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 2.25 MB

english, 2009

10

PathBinder – text empirics and automatic extraction of biomolecular interactions

Lifeng Zhang, Daniel Berleant, Jing Ding, Tuan Cao, Eve Syrkin Wurtele

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.54 MB

english, 2009

11

Graph ranking for exploratory gene data analysis

Cuilan Gao, Xin Dang, Yixin Chen, Dawn Wilkins

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.12 MB

english, 2009

12

Facilitating functional annotation of chicken microarray data

Teresia J Buza, Ranjit Kumar, Cathy R Gresham, Shane C Burgess, Fiona M McCarthy

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 383 KB

english, 2009

13

Integrating phenotype and gene expression data for predicting gene function

Brandon M Malone, Andy D Perkins, Susan M Bridges

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 890 KB

english, 2009

14

Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom

Zhanyou Xu, Dandan Zhang, Jun Hu, Xin Zhou, Xia Ye, Kristen L Reichel, Nathan R Stewart, Ryan D Syrenne, Xiaohan Yang, Peng Gao, Weibing Shi, Crissa Doeppke, Robert W Sykes, Jason N Burris, Joseph J B

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 1.69 MB

english, 2009

15

Threshold selection in gene co-expression networks using spectral graph theory techniques

Andy D Perkins, Michael A Langston

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 627 KB

english, 2009

16

HPD: an online integrated human pathway database enabling systems biology studies

Sudhir R Chowbina, Xiaogang Wu, Fan Zhang, Peter M Li, Ragini Pandey, Harini N Kasamsetty, Jake Y Chen

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 6.22 MB

english, 2009

17

Computational analysis of gene expression space associated with metastatic cancer

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 963 KB

english, 2009

18

Exploratory visual analysis of conserved domains on multiple sequence alignments

TJ Jankun-Kelly, Andrew D Lindeman, Susan M Bridges

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 986 KB

english, 2009

19

Structural and functional-annotation of an equine whole genome oligoarray

Lauren A Bright, Shane C Burgess, Bhanu Chowdhary, Cyprianna E Swiderski, Fiona M McCarthy

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 669 KB

english, 2009

20

Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data

HJ Bart van den Berg, Chamali Thanthiriwatte, Prashanti Manda, Susan M Bridges

Journal:

BMC Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 520 KB

english, 2009